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: GenomOncology Variant Significance - XML Representation

Active as of 2024-12-11

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<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="variant-significance-codesystem"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: CodeSystem variant-significance-codesystem</b></p><a name="variant-significance-codesystem"> </a><a name="hcvariant-significance-codesystem"> </a><a name="variant-significance-codesystem-en-US"> </a><p>This  code system <code>http://fhir.genomoncology.io/CodeSystem/variant-significance-codesystem</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style="white-space:nowrap">oncogenic<a name="variant-significance-codesystem-oncogenic"> </a></td><td>Oncogenic</td></tr><tr><td style="white-space:nowrap">likely_oncogenic<a name="variant-significance-codesystem-likely_oncogenic"> </a></td><td>Likely Oncogenic</td></tr><tr><td style="white-space:nowrap">vus<a name="variant-significance-codesystem-vus"> </a></td><td>VUS</td></tr><tr><td style="white-space:nowrap">likely_benign<a name="variant-significance-codesystem-likely_benign"> </a></td><td>Likely Benign</td></tr><tr><td style="white-space:nowrap">benign<a name="variant-significance-codesystem-benign"> </a></td><td>Benign</td></tr></table></div>
  </text>
  <url
       value="http://fhir.genomoncology.io/CodeSystem/variant-significance-codesystem"/>
  <version value="0.2.0"/>
  <name value="VariantSignificance"/>
  <title value="GenomOncology Variant Significance"/>
  <status value="active"/>
  <date value="2024-12-11T19:26:03+00:00"/>
  <publisher value="GenomOncology"/>
  <contact>
    <name value="GenomOncology"/>
    <telecom>
      <system value="url"/>
      <value value="http://genomoncology.com"/>
    </telecom>
  </contact>
  <description value="Variant tiers tied to implications"/>
  <content value="complete"/>
  <count value="5"/>
  <concept>
    <code value="oncogenic"/>
    <display value="Oncogenic"/>
  </concept>
  <concept>
    <code value="likely_oncogenic"/>
    <display value="Likely Oncogenic"/>
  </concept>
  <concept>
    <code value="vus"/>
    <display value="VUS"/>
  </concept>
  <concept>
    <code value="likely_benign"/>
    <display value="Likely Benign"/>
  </concept>
  <concept>
    <code value="benign"/>
    <display value="Benign"/>
  </concept>
</CodeSystem>